Ahmed Ahmed Portfolio

Ahmed Ahmed

Molecular Bioengineering Undergraduate Student

Welcome to my portfolio website!

I am seeking projects that let me combine analytical thinking with technical skills to develop impactful solutions in molecular bioengineering. My interests lie in leveraging bioinformatics within the biotech industry and exploring how computational methods can drive innovation in healthcare and biological research. I hope to pursue opportunities—both within and beyond my studies—that bridge science, technology and industry needs.

GitHub LinkedIn

Skills

Key skills that define my professional identity.

Python

Python

Versatile language for scripting, data analysis, and building bioinformatics pipelines.

MATLAB

High-level language and interactive environment for numerical computation, visualization, and programming.

java

Java

General-purpose, object-oriented language for building robust, large-scale applications.

Git

Git

Essential version control system for tracking code changes and collaborating on software projects.

ImageJ

Open-source image processing program widely used for analyzing scientific and medical images.

HTML5

HTML5

The standard markup language for creating the structure and content of web pages.

Projects

A showcase of my computational biology and software development projects.

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DNA QC Toolkit

Developed and optimized a high-performing quality control toolkit for DNA sequence analysis, emphasizing efficiency and accuracy.

Bioinformatics
Computational Bioengineering
UI/UX
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Gene Expression Explorer

An interactive web app for gene expression data analysis and visualization. Upload your dataset, define sample groups easily, view heatmaps, volcano plots, gene boxplots, and download results—all powered by Streamlit and Python.

Computational Bioengineering
Web Dev
UI/UX
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HMM Nanopore Basecaller

Explored and developed Hidden Markov Models for basecalling raw nanopore POD5 files.

Bioinformatics
Computational Bioengineering
Blog